









|
Speaker |
Title |
Date |
|
Donghyo Kim
|
Predicting and interpreting large-scale mutagenesis data using analyses of protein stability and conservation
Journal |
Cell Reports 2022 |
|
Author |
Magnus Haraldson Hie, Matteo Cagiada, Anders Haagen Beck Frederiksen, Amelie Stein, Kresten Lindorff-Larsen |
|
2022-08-02 |
Inhae Kim
|
A Deep Learning Approach to Antibiotic Discovery
Journal |
Cell. 180, 688702.e13 (2020). |
|
Author |
Stokes et al., |
|
2022-07-26 |
Sungnam Kim
|
Occult polyclonality of preclinical pancreatic cancer models drives in vitro evolution
Journal |
Nature Communication, 2022 |
|
Author |
Maria E. Monberg, Heather Geiger, Jaewon J. Lee, Roshan Sharma, Alexander Semaan, Vincent Bernard, Justin Wong, Fang Wang, Shaoheng Liang, Daniel B. Swartzlander,..., Paola A. Guerrero and Anirban Maitra |
|
2022-07-12 |
Sehyoung Cheong
|
Network medicine for disease module identification and drug repurposing with the NeDRex platform
Journal |
Nature Communication, 2021 |
|
Author |
Sadegh, S., Skelton, J., Anastasi, E., Bernett, J., Blumenthal, D. B., Galindez, G., ... & Kacprowski, T. |
|
2022-07-06 |
Juhun Lee
|
Single-cell transcriptional diversity is a hallmark of developmental potential
Journal |
Science, 2020Zhen Zhang, ZiXian Wang, YanXing Chen, HaoXiang Wu, Ling Yin, Qi Zhao, HuiYan Luo, ZhaoLei Zeng, MiaoZhen Qiu and RuiHua Xu |
|
Author |
Gunsagar S. Gulati, Shaheen S. Sikandar, Daniel J. Wesche, Anoop Manjunath, Anjan Bharadwaj, Mark J. Berger, Francisco Ilagan, Angera H. Kuo, Robert W. Hsieh, Shang Cai, Maider Zabala, ... and Aaron M. Newman |
|
2022-06-28 |
Hyeongseop Kim
|
Oncoprotein-specific molecular interaction maps(SigMaps) for cancer network analyses
Journal |
Nature Biotechnology, 2021 |
|
Author |
Joshua Broyde, David R. Simpson, Diana Murray, Evan O. Paull, Brennan W. Chu, Somnath Tagore, Sunny J. Jones, Aaron T. Griffin, Federico M. Giorgi, Alexander Lachmann, Peter Jackson, E. Alejandro Sweet-Cordero, Barry Honig & Andrea Califano |
|
2022-06-21 |
Youngchul Oh
|
Predicting cancer prognosis and drug response from the tumor microbiome
Journal |
Nature Communications, 2022 |
|
Author |
Leandro C. Hermida, E. Michael Gertz & Eytan Ruppin |
|
2022-06-14 |
Hyunsoo Ahn
|
Structure-based protein function prediction using graph convolutional networks
Journal |
Nature Communications, 2021 |
|
Author |
Vladimir Gligorijevi, P. Douglas Renfrew, Tomasz Kosciolek, Julia Koehler Leman, Daniel Berenberg, Tommi Vatanen, Chris Chandler, Bryn C. Taylor, Ian M. Fisk, Hera Vlamakis, Ramnik J. Xavier, Rob Knight, Kyunghyun Cho & Richard Bonneau |
|
2022-06-07 |
Minhyuk Park
|
An orthologous gene coevolution network provides insight into eukaryotic cellular and genomic structure and function.
Journal |
Science advances, 2022 |
|
Author |
Steenwyk, J. L., Phillips, M. A., Yang, F., Date, S. S., Graham, T. R., Berman, J., ... & Rokas, A. |
|
2022-05-31 |
Doyeon Ha
|
Synonymous mutations reveal genome-wide levels of positive selection in healthy tissues
Journal |
Nature genetics, 2021 |
|
Author |
Gladys Y. p. Poon, Caroline J. Watson ..., Jamie R. Blundell. |
|
2022-05-17 |
Donghyo Kim
|
Design of protein binding proteins from target structure alone
Journal |
Nature 2022 |
|
Author |
Longxing Cao, Brian Coventry, Inna Goreshnik, Buwei Huang, Joon Sung Park, Kevin M. Jude, Iva Markovi, Rameshwar U. Kadam, Koen H. G. Verschueren, Kenneth Verstraete, Scott Thomas Russell Walsh, Nathaniel Bennett, Ashish Phal, Aerin Yang, Lisa Kozodoy, Michelle DeWitt, Lora Picton, Lauren Miller, Eva-Maria Strauch, Nicholas D. DeBouver, Allison Pires, Asim K. Bera, Samer Halabiya, Bradley Hammerson, Wei Yang, Steffen Bernard, Lance Stewart, Ian A. Wilson, Hannele Ruohola-Baker, Joseph Schlessinger, Sangwon Lee, Savvas N. Savvides, K. Christopher Garcia & David Baker |
|
2022-05-03 |
Hyeongseop Kim
|
Single-cell analysis of patient-derived PDAC organoids reveals cell state heterogeneity and a conserved developmental hierarchy
Journal |
Nature communication, 2021 |
|
Author |
Teresa G.Krieger, Solange Le Blanc, Julia Jabs, ...& Christian Conrad. |
|
2022-04-19 |
Sehyoung Cheong
|
HeTDR: Drug repositioning based on heterogeneous networks and text mining.
Journal |
Patterns, 2021 |
|
Author |
Jin S, Niu Z, Jiang C, Huang W, Xia F, Jin X, Liu X, Zeng X. |
|
2022-04-12 |
Sungnam Kim
|
Clonal architecture predicts clinical outcomes and drug sensitivity in acute myeloid leukemia.
Journal |
Nature communications, 2021 |
|
Author |
Benard, B. A., Leak, L. B., Azizi, A., Thomas, D., Gentles, A. J., & Majeti, R. |
|
2022-04-05 |
Youngchul Oh
|
scTenifoldKnk: An efficient virtual knockout tool for gene function predictions via single-cell gene regulatory network perturbation
Journal |
Patterns, 2022 |
|
Author |
Daniel Osorio, Yan Zhong, ... , James J. Cai |
|
2022-03-29 |
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