|
|
| Speaker |
Title |
Date |
|
|
Donghyo Kim
|
CellBox: Interpretable Machine Learning for Perturbation Biology with Application to the Design of Cancer Combination Therapy
| Journal |
Cell Systems 2021 |
|
| Author |
Bo Yuan, Ciyue Shen, Augustin Luna, Anil Korkut, Debora Marks, John Ingraham, Chris Sander |
|
2021-01-19 |
|
Inhae Kim
|
Multiplex enCas12a screens detect functional buffering among paralogs otherwise masked in monogenic Cas9 knockout screens
| Journal |
Genome Biol. 21, 119 (2020). |
|
| Author |
M. Dede, M. McLaughlin, E. Kim, T. Hart, |
|
2021-01-12 |
|
Hyunsoo Ahn
|
Leveraging Uncertainty in Machine Learning Accelerates Biological Discovery and Design
| Journal |
Cell Systems 2020 |
|
| Author |
Brian Hie, Bryan D. Bryson, Bonnie Berger |
|
2020-12-29 |
|
Seongsu Lim
|
Molecular Choreography of Acute Exercise
| Journal |
Cell 2020 |
|
| Author |
Kvin Contrepois, Si Wu, Kegan J. Moneghetti, [...] Hassan Chaib, Francois Haddad, Michael P. Snyder |
|
2020-12-22 |
|
Kwanghwan Lee
|
Finding key players in complex networks through deep reinforcement learning
| Journal |
Nature Machine Intelligence 2020 |
|
| Author |
Changjun Fan, Li Zeng, Yizhou Sun & Yang-Yu Liu |
|
2020-12-01 |
|
Jungho Kong
|
Dr. VAE: improving drug response prediction via modeling of drug perturbation effects
| Journal |
Bioinformatics 2019 |
|
| Author |
Rampek, L., Hidru, D., Smirnov, P., Haibe-Kains, B., & Goldenberg, A. |
|
2020-11-24 |
|
Donghyo Kim
|
An integrative ENCODE resource for cancer genomics
| Journal |
Nature Communications 2020 |
|
| Author |
Jing Zhang, Donghoon Lee, [] Mark Gerstein |
|
2020-11-17 |
|
Inhae Kim
|
Predicting Drug Response and Synergy Using a Deep Learning Model of Human Cancer Cells
| Journal |
Cancer Cell 0, 113 (2020). |
|
| Author |
Brent M. Kuenzi, Jisoo Park, Samson H. Fong, Kyle S. Sanchez, John Lee, Jason F. Kreisberg, Jianzhu Ma, and Trey Ideker |
|
2020-11-10 |
|
Hyunsoo Ahn
|
Improved protein structure prediction using potentials from deep learning.
| Journal |
Nature 2020 |
|
| Author |
Andrew W. Senior, Richard Evans, John Jumper, James Kirkpatrick, Laurent Sifre, Tim Green, Chongli Qin, Augustin dek, Alexander W. R. Nelson, Alex Bridgland, Hugo Penedones, Stig Petersen, Karen Simonyan, Steve Crossan, Pushmeet Kohli, David T. Jones, David Silver, Koray Kavukcuoglu & Demis Hassabis |
|
2020-11-03 |
|
Seongsu Lim
|
CELLector: Genomics-Guided Selection of Cancer In Vitro Models
| Journal |
Cell Systems 2020 |
|
| Author |
Hanna Najgebauer, Mi Yang, Hayley E.Francies, Clare Pacini, Euan A.Stronach, Mathew J.Garnett, JulioSaez-Rodriguez & FrancescoIorio |
|
2020-10-27 |
|
Minhyuk Park
|
Predicting the frequencies of drug side effects.
| Journal |
Nature communications 2020 |
|
| Author |
Galeano, D., Li, S., Gerstein, M., & Paccanaro, A. |
|
2020-10-20 |
|
Doyeon Ha
|
Multi-omics prediction of immune-related adverse events during checkpoint immunotherapy
| Journal |
Nature communications 2020 |
|
| Author |
Ying Jing, Jin Liu, ..., Xinying Xue, Leng Han |
|
2020-10-13 |
|
Kwanghwan Lee
|
Computational inference of cancer-specific vulnerabilities in clinical samples
| Journal |
Genome Biology 2020 |
|
| Author |
Kiwon Jang, Min Ji Park,...,Suhwan Chang & Jung Kyoon Choi |
|
2020-10-06 |
|
Jungho Kong
|
Comprehensive evaluation of transcriptome-based cell-type quantification methods for immuno-oncology
| Journal |
Bioinformatics 2019 |
|
| Author |
Gregor Sturm, Francesca Finotello, Florent Petitprez, Jitao David Zhang, Jan Baumbach, Wolf H Fridman, Markus List, Tatsiana Aneichyk |
|
2020-09-29 |
|
Donghyo Kim
|
An evolution-based model for designing chorismate mutase enzymes
| Journal |
Science 2020 |
|
| Author |
William P Russ, Matteo Figliuzzi, Christian Stocker, Pierre Barrat-Charlaix, Michael Socolich, Peter Kast, Donald Hilvert, Remi Monasson, Simona Cocco, Martin Weigt, Rama Ranganathan |
|
2020-09-22 |
|
|
