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| Speaker |
Title |
Date |
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Jungho Kong
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Deep learning suggests that gene expression is encoded in all parts of a co-evolving interacting gene regulatory structure
| Journal |
Nat Comm. 2020 Dec 1;11(1):6141. doi: 10.1038/s41467-020-19921-4. |
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| Author |
Jan Zrimec, Christoph S. Brlin, Filip Buric, Azam Sheikh Muhammad, Rhongzen Chen, Verena Siewers, Vilhelm Verendel, Jens Nielsen, Mats Tpel & Aleksej Zelezniak |
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2021-08-24 |
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Inhae Kim
|
Subclonal reconstruction of tumors by using machine learning and population genetics
| Journal |
Nat Genet. 2020 Sep;52(9):898-907 |
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| Author |
Giulio Caravagna, Timon Heide, Marc J Williams, Luis Zapata, Daniel Nichol, Ketevan Chkhaidze, William Cross, George D Cresswell, Benjamin Werner, Ahmet Acar, Louis Chesler, Chris P Barnes, Guido Sanguinetti, Trevor A Graham, Andrea Sottoriva, |
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2021-08-10 |
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Youngchul Oh
|
Barcoded viral tracing of single-cell interactions in central nervous system inflammation.
| Journal |
Science 2021 |
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| Author |
Iain C. Clark, Cristina Gutierrez-Vazquez, Michael A. Wheeler...Francisco J. Quintana |
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2021-08-03 |
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Juhun Lee
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Interpretable systems biomarkers predict response to immune-checkpoint inhibitors.
| Journal |
Patterns 2021 |
|
| Author |
scarLapuente-Santana, Maisavan Genderen, Peter A.J.Hilbers, Francesca Finotello, Federica Eduati, |
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2021-07-27 |
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Hyunsoo Ahn
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Learning the language of viral evolution and escape
| Journal |
Science 2021 |
|
| Author |
Brian Hie, Ellen D. Zhong, Bonnie Berger, Bryan Bryson, |
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2021-07-20 |
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Seongsu Lim
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Network medicine framework for identifying drug-repurposing opportunities for COVID-19.
| Journal |
Proceedings of the National Academy of Sciences (PNAS) 2021 |
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| Author |
Deisy Morselli Gysi, talo do Valle, Marinka Zitnik, Asher Ameli, Xiao Gan, Onur Varol, Susan Dina Ghiassian, J. J. Patten, Robert A. Davey, Joseph Loscalzo and Albert-Lszl Barabsi, |
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2021-07-13 |
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Minhyuk Park
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Bioactivity descriptors for uncharacterized chemical compounds.
| Journal |
Nature Communications 2021 |
|
| Author |
Bertoni, M., Duran-Frigola, M., Badia-i-Mompel, P., Pauls, E., Orozco-Ruiz, M., Guitart-Pla, O., ... & Aloy, P., |
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2021-07-05 |
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Doyeon Ha
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Developmental Gene Expression Differencesbetween Humans and Mammalian Models
| Journal |
Cell Reports 2020 |
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| Author |
M Cardoso-Moreira et al., |
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2021-06-29 |
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Jungho Kong
|
Determining cell type abundance and expression from bulk tissues with digital cytometry.
| Journal |
Nature Biotechnology 2019 |
|
| Author |
Aaron Newman et al., |
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2021-06-15 |
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Donghyo Kim
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Interpretation of T cell states from single-cell transcriptomics data using reference atlases.
| Journal |
Nature Communications 2021 |
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| Author |
Massimo Andreatta, Jesus Corria-Osorio, Sren Mller, Rafael Cubas, George Coukos & Santiago J. Carmona |
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2021-06-08 |
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Inhae Kim
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Environmental robustness of the global yeast genetic interaction network
| Journal |
Science 2021 |
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| Author |
Costanzo, M. et al., |
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2021-06-01 |
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Youngchul Oh
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Phylogenetic ctDNA analysis depicts early-stage lung cancer evolution
| Journal |
Nature 2017 |
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| Author |
Christopher Abbosh, Nicolai J. Birkbak, Gareth A. Wilson, Mariam Jamal-Hanjani, Tudor Constantin, Raheleh Salari, John Le Quesne,... & Charles Swanton |
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2021-05-25 |
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Juhun Lee
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Inference and analysis of cell-cell communication using Cellchat
| Journal |
Nature Communications 2021 |
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| Author |
Suoqin Jin, Christian F. Guerrero-Juarez, Lihua Zhang, Ivan Chang, Raul Ramos, Chen-Hsiang Kuan, Peggy Myung, Maksim V. Plikus and Qing Nie |
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2021-05-18 |
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Hyunsoo Ahn
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Integration of multiomics data with graph convolutional networks to identify new cancer genes and their associated molecular mechanisms
| Journal |
Nature Machine Intelligence 2021 |
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| Author |
Roman Schulte-Sasse, Stefan Budach, Denes Hnisz and Annalisa Marsico |
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2021-05-11 |
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Seongsu Lim
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A longitudinal big data approach for precision health
| Journal |
Nature medicine 2019 |
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| Author |
Sophia Miryam Schssler-Fiorenza Rose, Kvin Contrepois, ..., & Michael P. Snyder |
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2021-05-04 |
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